Function reference • Isinglandr

All functions

MDDConnectivity MDDThresholds: Estimation data for the Ising network of major depressive disorder

autolayer(<resilience_2d_Isingland>): Get ggplot2 layers of resilience metrics to add to the landscape plots

calculate_barrier(<2d_Isingland>) calculate_barrier(<2d_Isingland_matrix>) print(<barrier_2d_Isingland>) summary(<barrier_2d_Isingland>) summary(<barrier_2d_Isingland_matrix>): Calculate energy barrier for Ising landscapes

calculate_resilience(): Calculate the resilience values for Ising landscapes

chain_simulate_Isingland() make_Ising_chain(): Make Ising chains from (a series of) Ising grid(s) and perform a chain simulation.

make_2d_Isingland(): Make a 2D landscape for an Ising network

make_2d_Isingland_matrix(): Make a matrix of landscapes for multiple Ising networks

make_3d_Isingland(): Make a 3D landscape for an Ising network

single_threshold() single_wei() all_thresholds() whole_weiadj() beta_list(): Control Functions to Specify the Varying Parameters for an Ising Grid.

make_Ising_grid(): Make a Grid to Specify Multiple Ising Networks

shiny_Isingland_MDD(): A shiny app that shows the landscape for the Ising network of major depressive disorder

simulate_Isingland(): Simulate a 2D Ising landscape